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MapReduce >> mail # user >> one minute delay in running a simple ls command on hadoop (maybe near security groups..): hadoop 0.23.5


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Re: one minute delay in running a simple ls command on hadoop (maybe near security groups..): hadoop 0.23.5
in case anybody has some idea on what I should look for in debugging this..
below is a strace of the simple bin/hadoop dfs -ls / command run on the
machine running namenode

% time     seconds  usecs/call     calls    errors syscall
------ ----------- ----------- --------- --------- ----------------
 49.56    0.000853          45        19        14 execve
 36.20    0.000623           1       925           rt_sigprocmask
  5.75    0.000099           2        62           brk
  5.29    0.000091           9        10           getgid
  3.20    0.000055           1        81           rt_sigaction
  0.00    0.000000           0        71           read
  0.00    0.000000           0         3           write
  0.00    0.000000           0        49        11 open
  0.00    0.000000           0        87           close
  0.00    0.000000           0        71        31 stat
  0.00    0.000000           0        36           fstat
  0.00    0.000000           0        12           lseek
  0.00    0.000000           0        72           mmap
  0.00    0.000000           0        36           mprotect
  0.00    0.000000           0         9           munmap
  0.00    0.000000           0        19           rt_sigreturn
  0.00    0.000000           0         2         2 ioctl
  0.00    0.000000           0        40        31 access
  0.00    0.000000           0        19           pipe
  0.00    0.000000           0         8           dup2
  0.00    0.000000           0         2           getpid
  0.00    0.000000           0        20           clone
  0.00    0.000000           0        38        19 wait4
  0.00    0.000000           0         2           uname
  0.00    0.000000           0        24         2 fcntl
  0.00    0.000000           0        16           getdents
  0.00    0.000000           0         2           readlink
  0.00    0.000000           0         2           gettimeofday
  0.00    0.000000           0         5           getrlimit
  0.00    0.000000           0        10           getuid
  0.00    0.000000           0        10           geteuid
  0.00    0.000000           0        10           getegid
  0.00    0.000000           0         2           getppid
  0.00    0.000000           0         2           getpgrp
  0.00    0.000000           0         5           arch_prctl
  0.00    0.000000           0         2         1 futex
  0.00    0.000000           0         1           set_tid_address
  0.00    0.000000           0        10         2 openat
  0.00    0.000000           0         1           set_robust_list
------ ----------- ----------- --------- --------- ----------------
100.00    0.001721                  1795       113 total
On Sun, Mar 31, 2013 at 11:47 AM, Gopi Krishna M <[EMAIL PROTECTED]> wrote:

> Hi..
>
> I have installed hadoop 0.23.5 and is working fine on two of my
> installations.  In a new installation on Windows Azure VMs, I am seeing an
> inordinate delay (of 1 minute) when doing a simple dfs ls command.
>
> This is a 3 node cluster, running 64 bit Ubuntu 12.04.1 LTS, Sun jre
>
> command : bin/hadoop dfs -ls /
>
> With log set to DEBUG, following is the output on the console.  The logs
> in bold show the sleep/timeout/delay of *1 minute*.  Any pointers on what
> to check for / what is the reason for this delay?
>
> 13/03/31 05:48:55 DEBUG lib.MutableMetricsFactory: field
> org.apache.hadoop.metrics2.lib.MutableRate
> org.apache.hadoop.security.UserGroupInformation$UgiMetrics.loginSuccess
> with annotation @org.apache.
> hadoop.metrics2.annotation.Metric(valueName=Time, about=, value=[Rate of
> successful kerberos logins
> and latency (milliseconds)], always=false, type=DEFAULT, sampleName=Ops)
> 13/03/31 05:48:55 DEBUG lib.MutableMetricsFactory: field
> org.apache.hadoop.metrics2.lib.MutableRate
> org.apache.hadoop.security.UserGroupInformation$UgiMetrics.loginFailure
> with annotation @org.apache.
> hadoop.metrics2.annotation.Metric(valueName=Time, about=, value=[Rate of